Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015944907.1_cds_XP_016487604.1_78315
CDS Infomation

[gene=LOC107807685] [db_xref=GeneID:107807685] [protein=cyclic nucleotide-gated ion channel 4-like isoform X2] [protein_id=XP_016487604.1] [location=complement(join(12176..12425,13178..13443,14265..14351,14840..15076,15871..15979,16691..17004,20116..20610))] [gbkey=CDS]
Sequence

ATGACTAGTCATTACGAGGATATATACAGTGTCAGTGACGACTACAACGAGGACGACGAC
GACGACGAAGAAATTGTTGAAGAAGAAGAAGAAAATAACTCACAAGAATGTAACAAATTT
CAAGAAGGTAGAAATAAAGGAGAATTATTCATAGAATTTTTCTCAAGAAATAAGATAATA
GACCCTAGAGCACAATGGGTTCAAGAATGGAACAGAGTATTTTTATTAGCATGTGCCATA
GGGCTATTTTTAGACCCTTTATTTTTCTATGCTCTTTCTATAAGTGAGAGTTGCATGTGT
CTCTTCGTCGACGGTTGGTTCGCCGTCACCGTGACGGCGCTCCGGTGCATGACCGATGCA
TTGCACGTGTGGAACATGTGGTTGCAATTCAAGATGATCAACAGATCGCGGCGAAATCAT
ATGGTGGCTCAGCCATACTTTAAGGCGAAGAAGGGTTTCCTTTTTGATCTCTTTGTTATC
CTCCCTTTACCCCAGGCCGTGGGAGCATGTTGGTACTTGCTAGGAATCCAAAGGGCAGCA
AAATGTCTAAAAGAACAGTGCAGAGTTACAAATGGCTGTGGCCTCAAAATGTTGGCATGT
CAAGAGCCAATTTACTATGGAACAAGTAATTTAGTGAAGGAAAAAAGTCGATTAATTTGG
GGAGAAACCAGTAATGCAAGATTTACATGCTTAAACAATGGAGAAAATTTTGATTATGGA
GCTTATAAATGGACTGTTCAACTTTTTGCAAATGAAAATCGTTTTGAGAAGATACTTCTT
CCCATCTTTTGGGGTCTCATGACTCTCAGTACATTTGGGAACTTGGAGAGCACAACAGAT
TGGCTAGAAGTGATTTTCATAATCATCGTTCTTACCTCTGGGCTAATTCTGGTCACCATG
TTTATTGGTAATATCAAGGTGTTCTTGCATGCAACAACATCAAAGAAACAGGCAATGCAA
CTAAAGATGAGAAATATAGAATGGTGGATGAGGAGAAGACATTTGCCTCGAGAGTTAAAG
CAGAGAACTCGAAATTTTGAAAGGCAAAAATGGGCAGCAATGAGAGGAGTTGATGAATGT
GAAATGATCAGAAATCTGCCTGAGGGCCTTAGGAGGGACATTAAATATCATCTGTGTTTG
GACTTGGTCAGACAGGTGCCTTTGTTTCAACATATGGATAATTTGGTGCTGGAGAACATA
TGTGATCGCGTGAAGTCCCTGATATTTACTAAGGGCGAAACAATAACAAAGGAGGGTGAT
CCAGTTCAGAGAATGTTATTTATAGTAAGAGGTCATCTACAAAGTAGCCAATTATTGAGA
GATGGAGTAAAAAGTTGTTGCATGTTAGGTCCCGGCAACTTCAGCGGAGATGAACTTCTG
TCGTGGTGCCTCCGGCGGCCTTTTGTAGAGCGGCTACCACCGTCATCGTCGACACTCGTG
ACGCTCGAGACCACCGAAGCGTTCGGGCTCGAGGCCGAAGACGTCAAGTATGTCACACAA
CATTTCAGGTATACATTTGTGAAAGAAAAAGTGAAGAGAAGTGCAAGATATTATTCACCA
GGGTGGAGAACTTGGGGTGCTGTTGCTATTCAATTGGCTTGGAGGAGATATAAACATCGT
TTAACACTTACTTCTTTGTCATTCATTAGACCAAGAAGGCCATTGTCTCGTTGTTCTTCG
TTAGGAGAGGATCGACTTAGAATTTATACTGCTTTGTTAACTTCACCTAAGCCAAATCAA
GATGATTTTGATTTCTAA

Peptide Sequence

PEP ID

XP_016487604.1
PEP Infomation

PREDICTED: cyclic nucleotide-gated ion channel 4-like isoform X2 [Nicotiana tabacum]
Sequence

MTSHYEDIYSVSDDYNEDDDDDEEIVEEEEENNSQECNKFQEGRNKGELFIEFFSRNKII
DPRAQWVQEWNRVFLLACAIGLFLDPLFFYALSISESCMCLFVDGWFAVTVTALRCMTDA
LHVWNMWLQFKMINRSRRNHMVAQPYFKAKKGFLFDLFVILPLPQAVGACWYLLGIQRAA
KCLKEQCRVTNGCGLKMLACQEPIYYGTSNLVKEKSRLIWGETSNARFTCLNNGENFDYG
AYKWTVQLFANENRFEKILLPIFWGLMTLSTFGNLESTTDWLEVIFIIIVLTSGLILVTM
FIGNIKVFLHATTSKKQAMQLKMRNIEWWMRRRHLPRELKQRTRNFERQKWAAMRGVDEC
EMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDNLVLENICDRVKSLIFTKGETITKEGD
PVQRMLFIVRGHLQSSQLLRDGVKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLV
TLETTEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWGAVAIQLAWRRYKHR
LTLTSLSFIRPRRPLSRCSSLGEDRLRIYTALLTSPKPNQDDFDF

Transcript Sequence

Gene sequence data has not been registered.